Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs61690701 chr5:19338349 G/A 0 288 25.97 23.6 4.07 KM Plot
KIRP rs61740274 chr15:60803741 C/T 3.87E-5 285 25.53 26.57 14.88 KM Plot
KIRP rs61742093 chr6:27879982 A/G 1.65E-8 285 25.58 29.43 9.77 KM Plot
KIRP rs61745599 chr17:78355494 C/G 2.21E-8 282 24.48 37 9.77 KM Plot
KIRP rs61761681 chr3:124483190 G/A 2.16E-6 279 26.37 23.63 16.4 KM Plot
KIRP rs61781792 chr1:58986680 T/C 2.44E-5 288 25.6 26.82 13.17 KM Plot
KIRP rs61781818 chr1:58998260 T/C 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs61781819 chr1:58998327 A/G 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs61813236 chr1:181723448 T/A 4.69E-5 287 20.53 29.87 23.4 KM Plot
KIRP rs61813237 chr1:181723449 G/T 4.69E-5 287 20.53 29.87 23.4 KM Plot
KIRP rs61813238 chr1:181723451 C/A 4.69E-5 287 20.53 29.87 23.4 KM Plot
KIRP rs61822566 chr1:205078660 T/C 7.28E-5 288 23.02 28.03 21.9 KM Plot
KIRP rs61835222 chr1:231537917 C/A 0.000157 284 20.6 27.43 25.37 KM Plot
KIRP rs61843172 chr10:43518775 A/G 1.63E-5 288 25.7 25.95 11.43 KM Plot
KIRP rs61843173 chr10:43519485 G/A 4.3E-5 289 25.67 25.95 11.43 KM Plot